IL_8BGE_073
3D structure
- PDB id
- 8BGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 8BGE|1|0|A|1938, 8BGE|1|0|U|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BGE_073 not in the Motif Atlas
- Geometric match to IL_7A0S_072
- Geometric discrepancy: 0.1726
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
8BGE|1|0|C|1934
8BGE|1|0|G|1935
8BGE|1|0|A|1936
8BGE|1|0|A|1937
8BGE|1|0|A|1938
8BGE|1|0|U|1939
8BGE|1|0|U|1940
8BGE|1|0|C|1941
8BGE|1|0|C|1942
8BGE|1|0|U|1943
8BGE|1|0|U|1944
8BGE|1|0|G|1945
*
8BGE|1|0|C|1961
8BGE|1|0|C|1962
8BGE|1|0|U|1963
8BGE|1|0|G|1964
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A
- 50S ribosomal protein L2
Coloring options: