IL_8BGE_146
3D structure
- PDB id
- 8BGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- GCAAAC*GGUAGU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BGE_146 not in the Motif Atlas
- Geometric match to IL_8ZA4_001
- Geometric discrepancy: 0.3541
- The information below is about IL_8ZA4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
8BGE|1|2|G|778
8BGE|1|2|C|779
8BGE|1|2|A|780
8BGE|1|2|A|781
8BGE|1|2|A|782
8BGE|1|2|C|783
*
8BGE|1|2|G|799
8BGE|1|2|G|800
8BGE|1|2|U|801
8BGE|1|2|A|802
8BGE|1|2|G|803
8BGE|1|2|U|804
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain o
- 30S ribosomal protein S11
- Chain y
- 30S ribosomal protein S21
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