IL_8BGH_042

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CCCAGACAG*CGAG

Length

13 nucleotides

Bulged bases

8BGH|1|0|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|0|C|1043
8BGH|1|0|C|1044
8BGH|1|0|C|1045
8BGH|1|0|A|1046
8BGH|1|0|G|1047
8BGH|1|0|A|1048
8BGH|1|0|C|1049
8BGH|1|0|A|1050
8BGH|1|0|G|1051
*
8BGH|1|0|C|1109
8BGH|1|0|G|1110
8BGH|1|0|A|1111
8BGH|1|0|G|1112

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain E

50S ribosomal protein L6