IL_8BGH_190

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

8BGH|1|0|A|1938, 8BGH|1|0|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|0|C|1934
8BGH|1|0|G|1935
8BGH|1|0|A|1936
8BGH|1|0|A|1937
8BGH|1|0|A|1938
8BGH|1|0|U|1939
8BGH|1|0|U|1940
8BGH|1|0|C|1941
8BGH|1|0|C|1942
8BGH|1|0|U|1943
8BGH|1|0|U|1944
8BGH|1|0|G|1945
8BGH|1|0|U|1946
*
8BGH|1|0|A|1960
8BGH|1|0|C|1961
8BGH|1|0|C|1962
8BGH|1|0|U|1963
8BGH|1|0|G|1964

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain A

50S ribosomal protein L2