IL_8BH4_182
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- UCA*UGUUA
- Length
- 8 nucleotides
- Bulged bases
- 8BH4|1|0|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BH4_182 not in the Motif Atlas
- Geometric match to IL_4V88_507
- Geometric discrepancy: 0.2428
- The information below is about IL_4V88_507
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8BH4|1|0|U|847
8BH4|1|0|C|848
8BH4|1|0|A|849
*
8BH4|1|0|U|929
8BH4|1|0|G|930
8BH4|1|0|U|931
8BH4|1|0|U|932
8BH4|1|0|A|933
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain W
- 50S ribosomal protein L30
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