IL_8BH4_183

3D structure

PDB id

8BH4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

8BH4|1|0|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH4|1|0|G|856
8BH4|1|0|G|857
8BH4|1|0|G|858
8BH4|1|0|G|859
8BH4|1|0|U|860
8BH4|1|0|A|861
8BH4|1|0|G|862
8BH4|1|0|A|863
*
8BH4|1|0|U|913
8BH4|1|0|G|914
8BH4|1|0|C|915
8BH4|1|0|G|916
8BH4|1|0|A|917
8BH4|1|0|A|918
8BH4|1|0|U|919
8BH4|1|0|A|920
8BH4|1|0|C|921

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 1

5S ribosomal RNA; 5S rRNA

Chain J

50S ribosomal protein L16

Chain T

50S ribosomal protein L27

Chain W

50S ribosomal protein L30