IL_8BH4_184

3D structure

PDB id

8BH4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

AGCACUG*CAAACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH4|1|0|A|863
8BH4|1|0|G|864
8BH4|1|0|C|865
8BH4|1|0|A|866
8BH4|1|0|C|867
8BH4|1|0|U|868
8BH4|1|0|G|869
*
8BH4|1|0|C|908
8BH4|1|0|A|909
8BH4|1|0|A|910
8BH4|1|0|A|911
8BH4|1|0|C|912
8BH4|1|0|U|913

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 1

5S ribosomal RNA; 5S rRNA

Chain J

50S ribosomal protein L16