IL_8BHJ_180
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CGG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CGG,CCG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_180 not in the Motif Atlas
- Homologous match to IL_4V9K_064
- Geometric discrepancy: 0.3459
- The information below is about IL_4V9K_064
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
8BHJ|1|4|C|51
8BHJ|1|4|G|52
8BHJ|1|4|G|53
*
8BHJ|1|4|C|61
8BHJ|1|4|C|62
8BHJ|1|4|G|63
Current chains
- Chain 4
- Deacylated P-site tRNA(fMet)
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 50S ribosomal protein L16
- Chain T
- 50S ribosomal protein L27
Coloring options: