IL_8BHJ_189
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_189 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1142
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
8BHJ|1|0|G|1666
8BHJ|1|0|G|1667
8BHJ|1|0|A|1668
8BHJ|1|0|A|1669
8BHJ|1|0|C|1670
8BHJ|1|0|U|1671
8BHJ|1|0|A|1672
8BHJ|1|0|G|1673
8BHJ|1|0|G|1674
*
8BHJ|1|0|C|1990
8BHJ|1|0|U|1991
8BHJ|1|0|G|1992
8BHJ|1|0|U|1993
8BHJ|1|0|C|1994
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain H
- 50S ribosomal protein L14
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