IL_8BHJ_203

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

8BHJ|1|0|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|G|856
8BHJ|1|0|G|857
8BHJ|1|0|G|858
8BHJ|1|0|G|859
8BHJ|1|0|U|860
8BHJ|1|0|A|861
8BHJ|1|0|G|862
8BHJ|1|0|A|863
*
8BHJ|1|0|U|913
8BHJ|1|0|G|914
8BHJ|1|0|C|915
8BHJ|1|0|G|916
8BHJ|1|0|A|917
8BHJ|1|0|A|918
8BHJ|1|0|U|919
8BHJ|1|0|A|920
8BHJ|1|0|C|921

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 1

5S ribosomal RNA; 5S rRNA

Chain J

50S ribosomal protein L16

Chain T

50S ribosomal protein L27

Chain W

50S ribosomal protein L30