IL_8BHL_006
3D structure
- PDB id
- 8BHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHL_006 not in the Motif Atlas
- Homologous match to IL_5J7L_250
- Geometric discrepancy: 0.1112
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8BHL|1|0|G|188
8BHL|1|0|G|189
8BHL|1|0|A|190
8BHL|1|0|A|191
8BHL|1|0|C|192
8BHL|1|0|U|193
8BHL|1|0|G|194
*
8BHL|1|0|C|201
8BHL|1|0|U|202
8BHL|1|0|A|203
8BHL|1|0|A|204
8BHL|1|0|G|205
8BHL|1|0|U|206
8BHL|1|0|A|207
8BHL|1|0|C|208
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain I
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L28
Coloring options: