IL_8BHL_073

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHL_073 not in the Motif Atlas

Geometric match to IL_4WF9_076

Geometric discrepancy: 0.1246

The information below is about IL_4WF9_076

Detailed Annotation

Bulged stacked bases

Broad Annotation

No text annotation

Motif group

IL_24886.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

12

Unit IDs

8BHL|1|0|G|1933
8BHL|1|0|C|1934
*
8BHL|1|0|G|1964
8BHL|1|0|C|1965
8BHL|1|0|A|1966
8BHL|1|0|C|1967

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 4

Transfer RNA; tRNA