IL_8BHN_010

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHN_010 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.1565

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

8BHN|1|0|U|293
8BHN|1|0|A|294
8BHN|1|0|G|295
*
8BHN|1|0|C|343
8BHN|1|0|A|344
8BHN|1|0|A|345
8BHN|1|0|A|346
8BHN|1|0|A|347

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain R

50S ribosomal protein L24