IL_8BHN_071

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

8BHN|1|0|A|1938, 8BHN|1|0|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|0|C|1934
8BHN|1|0|G|1935
8BHN|1|0|A|1936
8BHN|1|0|A|1937
8BHN|1|0|A|1938
8BHN|1|0|U|1939
8BHN|1|0|U|1940
8BHN|1|0|C|1941
8BHN|1|0|C|1942
8BHN|1|0|U|1943
8BHN|1|0|U|1944
8BHN|1|0|G|1945
8BHN|1|0|U|1946
*
8BHN|1|0|A|1960
8BHN|1|0|C|1961
8BHN|1|0|C|1962
8BHN|1|0|U|1963
8BHN|1|0|G|1964

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain 5

Transfer RNA; tRNA

Chain A

50S ribosomal protein L2