IL_8BHN_103
3D structure
- PDB id
- 8BHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GGUG*CUAAC
- Length
- 9 nucleotides
- Bulged bases
- 8BHN|1|0|A|2872, 8BHN|1|0|A|2873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHN_103 not in the Motif Atlas
- Homologous match to IL_5J7L_353
- Geometric discrepancy: 0.108
- The information below is about IL_5J7L_353
- Detailed Annotation
- Multiple bulged bases with non-canonical cWW
- Broad Annotation
- Multiple bulged bases with non-canonical cWW
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
8BHN|1|0|G|2843
8BHN|1|0|G|2844
8BHN|1|0|U|2845
8BHN|1|0|G|2846
*
8BHN|1|0|C|2870
8BHN|1|0|U|2871
8BHN|1|0|A|2872
8BHN|1|0|A|2873
8BHN|1|0|C|2874
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain K
- 50S ribosomal protein L17
- Chain M
- 50S ribosomal protein L19
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