IL_8BHN_151

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8BHN|1|2|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHN_151 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.1665

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

8BHN|1|2|G|925
8BHN|1|2|G|926
8BHN|1|2|G|927
*
8BHN|1|2|U|1390
8BHN|1|2|U|1391

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain 3

mRNA