IL_8BHN_198
3D structure
- PDB id
- 8BHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 8BHN|1|0|A|1938, 8BHN|1|0|U|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHN_198 not in the Motif Atlas
- Homologous match to IL_5J7L_319
- Geometric discrepancy: 0.1351
- The information below is about IL_5J7L_319
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42218.2
- Basepair signature
- cWW-L-R-cHW-cWW-L-L-L-R-L
- Number of instances in this motif group
- 5
Unit IDs
8BHN|1|0|C|1934
8BHN|1|0|G|1935
8BHN|1|0|A|1936
8BHN|1|0|A|1937
8BHN|1|0|A|1938
8BHN|1|0|U|1939
8BHN|1|0|U|1940
8BHN|1|0|C|1941
8BHN|1|0|C|1942
8BHN|1|0|U|1943
8BHN|1|0|U|1944
8BHN|1|0|G|1945
*
8BHN|1|0|C|1961
8BHN|1|0|C|1962
8BHN|1|0|U|1963
8BHN|1|0|G|1964
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain A
- 50S ribosomal protein L2
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