IL_8BHP_093

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

8BHP|1|0|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHP_093 not in the Motif Atlas

Homologous match to IL_7RQB_101

Geometric discrepancy: 0.2737

The information below is about IL_7RQB_101

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

8BHP|1|0|C|2591
8BHP|1|0|G|2592
*
8BHP|1|0|C|2601
8BHP|1|0|A|2602
8BHP|1|0|G|2603

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain A

50S ribosomal protein L2