IL_8BIL_013

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

ACG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: ACG,CGU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_013 not in the Motif Atlas

Geometric match to IL_6IA2_002

Geometric discrepancy: 0.1268

The information below is about IL_6IA2_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8BIL|1|0|A|541
8BIL|1|0|C|542
8BIL|1|0|G|543
*
8BIL|1|0|C|550
8BIL|1|0|G|551
8BIL|1|0|U|552

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain G

50S ribosomal protein L13

Chain O

50S ribosomal protein L21