IL_8BIL_074

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

CGAAAUUCCUUG*CCUG

Length

16 nucleotides

Bulged bases

8BIL|1|0|A|1938, 8BIL|1|0|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_074 not in the Motif Atlas

Homologous match to IL_7A0S_072

Geometric discrepancy: 0.1634

The information below is about IL_7A0S_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

8BIL|1|0|C|1934
8BIL|1|0|G|1935
8BIL|1|0|A|1936
8BIL|1|0|A|1937
8BIL|1|0|A|1938
8BIL|1|0|U|1939
8BIL|1|0|U|1940
8BIL|1|0|C|1941
8BIL|1|0|C|1942
8BIL|1|0|U|1943
8BIL|1|0|U|1944
8BIL|1|0|G|1945
*
8BIL|1|0|C|1961
8BIL|1|0|C|1962
8BIL|1|0|U|1963
8BIL|1|0|G|1964

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain A

50S ribosomal protein L2