IL_8BIL_130

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_130 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.1075

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

8BIL|1|2|U|409
8BIL|1|2|G|410
8BIL|1|2|A|411
8BIL|1|2|A|412
8BIL|1|2|G|413
8BIL|1|2|A|414
8BIL|1|2|A|415
8BIL|1|2|G|416
*
8BIL|1|2|U|427
8BIL|1|2|G|428
8BIL|1|2|U|429
8BIL|1|2|A|430
8BIL|1|2|A|431
8BIL|1|2|A|432
8BIL|1|2|G|433

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain h

30S ribosomal protein S4