IL_8BIM_114
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- CGAA*UG
- Length
- 6 nucleotides
- Bulged bases
- 8BIM|1|2|G|64, 8BIM|1|2|A|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIM_114 not in the Motif Atlas
- Homologous match to IL_5J7L_005
- Geometric discrepancy: 0.0949
- The information below is about IL_5J7L_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
8BIM|1|2|C|63
8BIM|1|2|G|64
8BIM|1|2|A|65
8BIM|1|2|A|66
*
8BIM|1|2|U|103
8BIM|1|2|G|104
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain x
- 30S ribosomal protein S20
Coloring options: