IL_8BIP_031
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUU*AUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIP_031 not in the Motif Atlas
- Homologous match to IL_8C3A_034
- Geometric discrepancy: 0.061
- The information below is about IL_8C3A_034
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_63959.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
8BIP|1|1|G|869
8BIP|1|1|G|870
8BIP|1|1|U|871
8BIP|1|1|U|872
*
8BIP|1|1|A|888
8BIP|1|1|U|889
8BIP|1|1|C|890
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain Lj
- 60S ribosomal protein L37-A
Coloring options: