IL_8BIP_034
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIP_034 not in the Motif Atlas
- Homologous match to IL_8C3A_037
- Geometric discrepancy: 0.0677
- The information below is about IL_8C3A_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8BIP|1|1|U|954
8BIP|1|1|U|955
8BIP|1|1|U|956
*
8BIP|1|1|A|965
8BIP|1|1|U|966
8BIP|1|1|A|967
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13-A
- Chain LQ
- 60S ribosomal protein L18-A
- Chain LT
- 60S ribosomal protein L21-A
- Chain La
- 60S ribosomal protein L28
- Chain Lb
- 60S ribosomal protein L29
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