3D structure

PDB id
8BIP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CAC*GGG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8BIP_131 not in the Motif Atlas
Geometric match to IL_2R8S_001
Geometric discrepancy: 0.1416
The information below is about IL_2R8S_001
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_87907.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
179

Unit IDs

8BIP|1|1|C|3233
8BIP|1|1|A|3234
8BIP|1|1|C|3235
*
8BIP|1|1|G|3252
8BIP|1|1|G|3253
8BIP|1|1|G|3254

Current chains

Chain 1
25S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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