IL_8BIP_154
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCAAC*GGA
- Length
- 8 nucleotides
- Bulged bases
- 8BIP|1|1|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIP_154 not in the Motif Atlas
- Homologous match to IL_8P9A_290
- Geometric discrepancy: 0.1129
- The information below is about IL_8P9A_290
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8BIP|1|1|U|1501
8BIP|1|1|C|1502
8BIP|1|1|A|1503
8BIP|1|1|A|1504
8BIP|1|1|C|1505
*
8BIP|1|1|G|1513
8BIP|1|1|G|1514
8BIP|1|1|A|1515
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 8
- Nascent peptide chain
- Chain LP
- 60S ribosomal protein L17-A
- Chain LR
- 60S ribosomal protein L19-A
- Chain Ll
- 60S ribosomal protein L39
Coloring options: