3D structure

PDB id
8BIP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GUCAGACGCAGCGG*CUUGUUGUAGACGGC
Length
29 nucleotides
Bulged bases
8BIP|1|1|C|2050
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BIP|1|1|G|1969
8BIP|1|1|U|1970
8BIP|1|1|C|1971
8BIP|1|1|A|1972
8BIP|1|1|G|1973
8BIP|1|1|A|1974
8BIP|1|1|C|1975
8BIP|1|1|G|1976
8BIP|1|1|C|1977
8BIP|1|1|A|1978
8BIP|1|1|G|1979
8BIP|1|1|C|1980
8BIP|1|1|G|1981
8BIP|1|1|G|1982
*
8BIP|1|1|C|2039
8BIP|1|1|U|2040
8BIP|1|1|U|2041
8BIP|1|1|G|2042
8BIP|1|1|U|2043
8BIP|1|1|U|2044
8BIP|1|1|G|2045
8BIP|1|1|U|2046
8BIP|1|1|A|2047
8BIP|1|1|G|2048
8BIP|1|1|A|2049
8BIP|1|1|C|2050
8BIP|1|1|G|2051
8BIP|1|1|G|2052
8BIP|1|1|C|2053

Current chains

Chain 1
25S rRNA

Nearby chains

Chain Lk
60S ribosomal protein L38

Coloring options:

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