3D structure

PDB id
8BIP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CUGAAUG*CGCG
Length
11 nucleotides
Bulged bases
8BIP|1|1|U|2209
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BIP|1|1|C|2204
8BIP|1|1|U|2205
8BIP|1|1|G|2206
8BIP|1|1|A|2207
8BIP|1|1|A|2208
8BIP|1|1|U|2209
8BIP|1|1|G|2210
*
8BIP|1|1|C|2235
8BIP|1|1|G|2236
8BIP|1|1|C|2237
8BIP|1|1|G|2238

Current chains

Chain 1
25S rRNA

Nearby chains

Chain LA
60S ribosomal protein L2-A

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1135 s