IL_8BJQ_084

3D structure

PDB id

8BJQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BJQ_084 not in the Motif Atlas

Geometric match to IL_5UNE_005

Geometric discrepancy: 0.3086

The information below is about IL_5UNE_005

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

8BJQ|1|1|C|1988
8BJQ|1|1|U|1989
8BJQ|1|1|U|1990
8BJQ|1|1|G|1991
*
8BJQ|1|1|C|2030
8BJQ|1|1|U|2031
8BJQ|1|1|U|2032
8BJQ|1|1|G|2033

Current chains

Chain 1

25S rRNA

Nearby chains

Chain D

N-terminal acetyltransferase B complex subunit MDM20