3D structure

PDB id
8BJQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GUCAGACGCAGCGG*CUUGUUGUAGACGGC
Length
29 nucleotides
Bulged bases
8BJQ|1|1|U|2044, 8BJQ|1|1|C|2050
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BJQ|1|1|G|1969
8BJQ|1|1|U|1970
8BJQ|1|1|C|1971
8BJQ|1|1|A|1972
8BJQ|1|1|G|1973
8BJQ|1|1|A|1974
8BJQ|1|1|C|1975
8BJQ|1|1|G|1976
8BJQ|1|1|C|1977
8BJQ|1|1|A|1978
8BJQ|1|1|G|1979
8BJQ|1|1|C|1980
8BJQ|1|1|G|1981
8BJQ|1|1|G|1982
*
8BJQ|1|1|C|2039
8BJQ|1|1|U|2040
8BJQ|1|1|U|2041
8BJQ|1|1|G|2042
8BJQ|1|1|U|2043
8BJQ|1|1|U|2044
8BJQ|1|1|G|2045
8BJQ|1|1|U|2046
8BJQ|1|1|A|2047
8BJQ|1|1|G|2048
8BJQ|1|1|A|2049
8BJQ|1|1|C|2050
8BJQ|1|1|G|2051
8BJQ|1|1|G|2052
8BJQ|1|1|C|2053

Current chains

Chain 1
25S rRNA

Nearby chains

Chain Lk
60S ribosomal protein L38

Coloring options:

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