IL_8BN3_052
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AUA*UU
- Length
- 5 nucleotides
- Bulged bases
- 8BN3|1|1|U|1181
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_052 not in the Motif Atlas
- Homologous match to IL_5TBW_050
- Geometric discrepancy: 0.0756
- The information below is about IL_5TBW_050
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8BN3|1|1|A|1180
8BN3|1|1|U|1181
8BN3|1|1|A|1182
*
8BN3|1|1|U|1324
8BN3|1|1|U|1325
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L7
- 60S ribosomal protein L7-A
- Chain M4
- 60S ribosomal protein L14-A
- Chain M6
- 60S ribosomal protein L16-A
- Chain N0
- 60S ribosomal protein L20-A
- Chain O3
- 60S ribosomal protein L33-A
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