IL_8BN3_058

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGACGGUGGC*GAAUCCGCUAAGGAGUGUGUAACAACUCACC

Length

41 nucleotides

Bulged bases

8BN3|1|1|G|1236, 8BN3|1|1|C|1257, 8BN3|1|1|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|1|G|1229
8BN3|1|1|G|1230
8BN3|1|1|A|1231
8BN3|1|1|C|1232
8BN3|1|1|G|1233
8BN3|1|1|G|1234
8BN3|1|1|U|1235
8BN3|1|1|G|1236
8BN3|1|1|G|1237
8BN3|1|1|C|1238
*
8BN3|1|1|G|1250
8BN3|1|1|A|1251
8BN3|1|1|A|1252
8BN3|1|1|U|1253
8BN3|1|1|C|1254
8BN3|1|1|C|1255
8BN3|1|1|G|1256
8BN3|1|1|C|1257
8BN3|1|1|U|1258
8BN3|1|1|A|1259
8BN3|1|1|A|1260
8BN3|1|1|G|1261
8BN3|1|1|G|1262
8BN3|1|1|A|1263
8BN3|1|1|G|1264
8BN3|1|1|U|1265
8BN3|1|1|G|1266
8BN3|1|1|U|1267
8BN3|1|1|G|1268
8BN3|1|1|U|1269
8BN3|1|1|A|1270
8BN3|1|1|A|1271
8BN3|1|1|C|1272
8BN3|1|1|A|1273
8BN3|1|1|A|1274
8BN3|1|1|C|1275
8BN3|1|1|U|1276
8BN3|1|1|C|1277
8BN3|1|1|A|1278
8BN3|1|1|C|1279
8BN3|1|1|C|1280

Current chains

Chain 1

25S ribosomal RNA

Nearby chains