IL_8BN3_123
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAC*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_123 not in the Motif Atlas
- Homologous match to IL_8C3A_130
- Geometric discrepancy: 0.1453
- The information below is about IL_8C3A_130
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8BN3|1|1|C|3164
8BN3|1|1|A|3165
8BN3|1|1|C|3166
*
8BN3|1|1|G|3284
8BN3|1|1|C|3285
8BN3|1|1|G|3286
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: