IL_8BN3_154

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAUAAAAAAUCAAUGUCUUCGGACUCUUUG*CAU

Length

34 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|2|A|213
8BN3|1|2|G|214
8BN3|1|2|A|215
8BN3|1|2|U|216
8BN3|1|2|A|217
8BN3|1|2|A|218
8BN3|1|2|A|219
8BN3|1|2|A|220
8BN3|1|2|A|221
8BN3|1|2|A|222
8BN3|1|2|U|223
8BN3|1|2|C|224
8BN3|1|2|A|225
8BN3|1|2|A|226
8BN3|1|2|U|227
8BN3|1|2|G|228
8BN3|1|2|U|229
8BN3|1|2|C|230
8BN3|1|2|U|231
8BN3|1|2|U|232
8BN3|1|2|C|233
8BN3|1|2|G|234
8BN3|1|2|G|235
8BN3|1|2|A|236
8BN3|1|2|C|237
8BN3|1|2|U|238
8BN3|1|2|C|239
8BN3|1|2|U|240
8BN3|1|2|U|241
8BN3|1|2|U|242
8BN3|1|2|G|243
*
8BN3|1|2|C|250
8BN3|1|2|A|251
8BN3|1|2|U|252

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C1

Small ribosomal subunit protein uS17A

Chain S4

Small ribosomal subunit protein eS4A

Chain S6

Small ribosomal subunit protein eS6A