IL_8BN3_173
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_173 not in the Motif Atlas
- Geometric match to IL_1SI2_002
- Geometric discrepancy: 0.1846
- The information below is about IL_1SI2_002
- Detailed Annotation
- Isolated non-canonical cWW contact
- Broad Annotation
- No text annotation
- Motif group
- IL_44465.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
8BN3|1|2|C|646
8BN3|1|2|G|647
8BN3|1|2|G|648
*
8BN3|1|2|C|686
8BN3|1|2|G|687
8BN3|1|2|G|688
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D2
- RPS22A isoform 1
Coloring options: