IL_8BN3_211

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGUG*UUAUCC

Length

10 nucleotides

Bulged bases

8BN3|1|2|U|1357, 8BN3|1|2|A|1358

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|2|G|1338
8BN3|1|2|G|1339
8BN3|1|2|U|1340
8BN3|1|2|G|1341
*
8BN3|1|2|U|1356
8BN3|1|2|U|1357
8BN3|1|2|A|1358
8BN3|1|2|U|1359
8BN3|1|2|C|1360
8BN3|1|2|C|1361

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C6

40S ribosomal protein S16-A

Chain C9

40S ribosomal protein S19-A

Chain D0

RPS20 isoform 1