IL_8BN3_214
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 8BN3|1|2|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_214 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.2698
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8BN3|1|2|G|1475
8BN3|1|2|U|1476
8BN3|1|2|C|1477
8BN3|1|2|U|1478
8BN3|1|2|A|1479
8BN3|1|2|A|1480
8BN3|1|2|C|1481
*
8BN3|1|2|G|1500
8BN3|1|2|U|1501
8BN3|1|2|A|1502
8BN3|1|2|A|1503
8BN3|1|2|U|1504
8BN3|1|2|C|1505
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C9
- 40S ribosomal protein S19-A
- Chain D0
- RPS20 isoform 1
- Chain D9
- RPS29A isoform 1
- Chain S3
- 40S ribosomal protein S3
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