IL_8BN3_244
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUAUU*AAGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_244 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.2061
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8BN3|1|2|G|885
8BN3|1|2|U|886
8BN3|1|2|A|887
8BN3|1|2|U|888
8BN3|1|2|U|889
*
8BN3|1|2|A|923
8BN3|1|2|A|924
8BN3|1|2|G|925
8BN3|1|2|A|926
8BN3|1|2|C|927
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C4
- 40S ribosomal protein S14-B
- Chain D6
- RPS26B isoform 1
- Chain L2
- 60S ribosomal protein L2-A
- Chain Q3
- 60S ribosomal protein L43-A
- Chain S1
- Small ribosomal subunit protein eS1
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