IL_8BN3_246

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUUGACA*UUUCUUGAU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|2|A|1217
8BN3|1|2|U|1218
8BN3|1|2|U|1219
8BN3|1|2|G|1220
8BN3|1|2|A|1221
8BN3|1|2|C|1222
8BN3|1|2|A|1223
*
8BN3|1|2|U|1236
8BN3|1|2|U|1237
8BN3|1|2|U|1238
8BN3|1|2|C|1239
8BN3|1|2|U|1240
8BN3|1|2|U|1241
8BN3|1|2|G|1242
8BN3|1|2|A|1243
8BN3|1|2|U|1244

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C0

Small ribosomal subunit protein eS10A

Chain C5

RPS15 isoform 1

Chain E1

RPS31 isoform 1