IL_8BPO_167

3D structure

PDB id

8BPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

8BPO|1|A1|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BPO|1|A1|G|5012
8BPO|1|A1|C|5013
8BPO|1|A1|A|5014
8BPO|1|A1|G|5015
8BPO|1|A1|A|5016
8BPO|1|A1|G|5017
*
8BPO|1|A1|C|5032
8BPO|1|A1|G|5033
8BPO|1|A1|A|5034
8BPO|1|A1|U|5035
8BPO|1|A1|C|5036

Current chains

Chain A1

28S ribosomal RNA

Nearby chains

Chain Q2

60S ribosomal protein L19

Chain V2

Ribosomal protein L24