IL_8BRM_050

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GGAAGG*CGC

Length

9 nucleotides

Bulged bases

8BRM|1|Lt|A|1240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|Lt|G|1237
8BRM|1|Lt|G|1238
8BRM|1|Lt|A|1239
8BRM|1|Lt|A|1240
8BRM|1|Lt|G|1241
8BRM|1|Lt|G|1242
*
8BRM|1|Lt|C|1251
8BRM|1|Lt|G|1252
8BRM|1|Lt|C|1253

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LA

Ribosomal protein L2

Chain LD

5.8S rRNA

Chain LI

Ribosomal protein L7a

Chain LO

Ribosomal protein L15

Chain LY

Ribosomal protein L23A