IL_8BRM_114

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GCGCCCCGCGG*CAGC

Length

15 nucleotides

Bulged bases

8BRM|1|St|C|175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|St|G|172
8BRM|1|St|C|173
8BRM|1|St|G|174
8BRM|1|St|C|175
8BRM|1|St|C|176
8BRM|1|St|C|177
8BRM|1|St|C|178
8BRM|1|St|G|179
8BRM|1|St|C|180
8BRM|1|St|G|181
8BRM|1|St|G|182
*
8BRM|1|St|C|188
8BRM|1|St|A|189
8BRM|1|St|G|190
8BRM|1|St|C|191

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain SE

Ribosomal protein S4

Chain SG

Ribosomal protein S6

Chain SI

Ribosomal protein S8

Chain SM

Ribosomal protein S11