IL_8BRM_116

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

CGGUC*GAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|St|C|233
8BRM|1|St|G|234
8BRM|1|St|G|235
8BRM|1|St|U|236
8BRM|1|St|C|237
*
8BRM|1|St|G|257
8BRM|1|St|A|258
8BRM|1|St|G|259

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain LS

Ribosomal protein L19

Chain Lt

Large subunit ribosomal RNA; LSU rRNA

Chain SI

Ribosomal protein S8

Chain SM

Ribosomal protein S11