IL_8BRM_122

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

AGGGCAAGGUCUG*CCAGCU

Length

19 nucleotides

Bulged bases

8BRM|1|St|G|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|St|A|430
8BRM|1|St|G|431
8BRM|1|St|G|432
8BRM|1|St|G|433
8BRM|1|St|C|434
8BRM|1|St|A|435
8BRM|1|St|A|436
8BRM|1|St|G|437
8BRM|1|St|G|438
8BRM|1|St|U|439
8BRM|1|St|C|440
8BRM|1|St|U|441
8BRM|1|St|G|442
*
8BRM|1|St|C|463
8BRM|1|St|C|464
8BRM|1|St|A|465
8BRM|1|St|G|466
8BRM|1|St|C|467
8BRM|1|St|U|468

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain SB

Ribosomal protein S2

Chain SC

Ribosomal protein S3

Chain SK

Ribosomal protein S9

Chain SO

Ribosomal protein S23

Chain Sj

Ribosomal protein S30