IL_8BTK_013

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

8BTK|1|A2|C|142, 8BTK|1|A2|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|A2|G|130
8BTK|1|A2|U|140
8BTK|1|A2|A|141
8BTK|1|A2|C|142
8BTK|1|A2|U|143
8BTK|1|A2|U|144
*
8BTK|1|A2|A|175
8BTK|1|A2|U|176
8BTK|1|A2|G|177
8BTK|1|A2|C|178
8BTK|1|A2|C|179
8BTK|1|A2|G|180
8BTK|1|A2|A|181
8BTK|1|A2|C|182

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Af

40S ribosomal protein S6