IL_8BTK_140

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

8BTK|1|B5|A|831, 8BTK|1|B5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|A|726
8BTK|1|B5|A|727
8BTK|1|B5|G|728
8BTK|1|B5|G|729
*
8BTK|1|B5|C|827
8BTK|1|B5|A|828
8BTK|1|B5|G|829
8BTK|1|B5|C|830
8BTK|1|B5|A|831
8BTK|1|B5|G|832
8BTK|1|B5|C|833
8BTK|1|B5|A|834
8BTK|1|B5|G|835
8BTK|1|B5|C|836
8BTK|1|B5|U|837

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BM

Ribosomal protein L14

Chain BS

60S ribosomal protein L18a