IL_8BTK_185
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGC*GG
- Length
- 5 nucleotides
- Bulged bases
- 8BTK|1|B5|G|1858
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BTK_185 not in the Motif Atlas
- Geometric match to IL_7D7V_002
- Geometric discrepancy: 0.3885
- The information below is about IL_7D7V_002
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 69
Unit IDs
8BTK|1|B5|U|1857
8BTK|1|B5|G|1858
8BTK|1|B5|C|1859
*
8BTK|1|B5|G|2002
8BTK|1|B5|G|2003
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BF
- uL30,60S ribosomal protein L7
- Chain BM
- Ribosomal protein L14
- Chain BO
- 60S ribosomal protein L13a
- Chain BS
- 60S ribosomal protein L18a
- Chain Bf
- 60S ribosomal protein L35a
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