IL_8BTK_230

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AA(PSU)GAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|G|3446
8BTK|1|B5|PSU|3447
8BTK|1|B5|C|3448
8BTK|1|B5|A|3449
8BTK|1|B5|A2M|3450
8BTK|1|B5|A|3451
8BTK|1|B5|G|3452
8BTK|1|B5|U|3453
*
8BTK|1|B5|A|3464
8BTK|1|B5|A|3465
8BTK|1|B5|PSU|3466
8BTK|1|B5|G|3467
8BTK|1|B5|A|3468
8BTK|1|B5|A|3469
8BTK|1|B5|G|3470
8BTK|1|B5|C|3471

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BA

60S ribosomal protein L8

Chain Bi

60S ribosomal protein L36

Chain Bo

eL42