IL_8BTK_285

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAAUG*CUCGC

Length

11 nucleotides

Bulged bases

8BTK|1|B5|U|4634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|G|4630
8BTK|1|B5|A|4631
8BTK|1|B5|A|4632
8BTK|1|B5|A|4633
8BTK|1|B5|U|4634
8BTK|1|B5|G|4635
*
8BTK|1|B5|C|4663
8BTK|1|B5|U|4664
8BTK|1|B5|C|4665
8BTK|1|B5|G|4666
8BTK|1|B5|C|4667

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BM

Ribosomal protein L14

Chain BO

60S ribosomal protein L13a