IL_8BTK_291

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8BTK|1|B5|G|4780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|U|4742
8BTK|1|B5|C|4743
8BTK|1|B5|G|4744
8BTK|1|B5|U|4745
8BTK|1|B5|A|4746
8BTK|1|B5|C|4747
8BTK|1|B5|G|4748
*
8BTK|1|B5|U|4778
8BTK|1|B5|U|4779
8BTK|1|B5|G|4780
8BTK|1|B5|A|4781
8BTK|1|B5|A|4782
8BTK|1|B5|A|4783

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BW

Ribosomal protein L24

Chain Bd

Ribosomal protein L31